PeptideDB

RBC8 361185-42-4

RBC8 361185-42-4

CAS No.: 361185-42-4

RBC8 is a novel and potent inhibitor of Ral GTPase with IC50 of 3.5 μM in H2122 cells and 3.4 μM in H358 cells. The Ra
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RBC8 is a novel and potent inhibitor of Ral GTPase with IC50 of 3.5 μM in H2122 cells and 3.4 μM in H358 cells. The Ras-like GTPases RalA and RalB play a significant role in the development and spread of tumors. Chemicals that inhibit Ral function have potential applications in cancer treatment and research. RBC8 and dual knockdown of RalA and RalB both reduced tumor growth to a comparable degree. RBC8 prevented Ral from binding to its effector RALBP1, as well as from causing human cancer cell lines to grow anchorage-independently and from spreading their cells through murine embryonic fibroblasts. When compared to the GTPases Ras and RhoA, RBC8 and BQU57 exhibit selectivity for Ral and inhibit the growth of tumor xenografts to a degree comparable to that of RNA interference-based Ral depletion.



Physicochemical Properties


Molecular Formula C25H20N4O3
Molecular Weight 424.45
Exact Mass 424.154
Elemental Analysis C, 70.74; H, 4.75; N, 13.20; O, 11.31
CAS # 361185-42-4
Related CAS #
361185-42-4
PubChem CID 6626226
Appearance White to off-white solid powder
LogP 5.165
Hydrogen Bond Donor Count 2
Hydrogen Bond Acceptor Count 6
Rotatable Bond Count 4
Heavy Atom Count 32
Complexity 764
Defined Atom Stereocenter Count 0
SMILES

O1C(=C(C#N)C([H])(C2C([H])=C(C([H])=C([H])C=2OC([H])([H])[H])OC([H])([H])[H])C2C1=NN([H])C=2C1C([H])=C([H])C2=C([H])C([H])=C([H])C([H])=C2C=1[H])N([H])[H]

InChi Key CLMQBVUFKIKYLU-UHFFFAOYSA-N
InChi Code

InChI=1S/C25H20N4O3/c1-30-17-9-10-20(31-2)18(12-17)21-19(13-26)24(27)32-25-22(21)23(28-29-25)16-8-7-14-5-3-4-6-15(14)11-16/h3-12,21H,27H2,1-2H3,(H,28,29)
Chemical Name

6-amino-4-(2,5-dimethoxyphenyl)-3-naphthalen-2-yl-2,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile
Synonyms

RBC-8; RBC8; RBC 8
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


ln Vitro

In vitro activity: RBC8 causes RalB–GDP to undergo chemical shift changes, which lessens RalA's activation in living cells as well. The RBC8 induces anchorage-independent growth inhibition in Ral-dependent lines H2122 and H358 at IC50 values of 3.5 µM and 3.4 µM, in that order.

ln Vivo
RBC8 (50 mg/kg i.p.) prevents tumor growth in mice carrying H358 xenografts by specifically inhibiting RalA and RalB.
Enzyme Assay For fifteen minutes at thirty degrees Celsius, His-RalA (100 ng) was incubated with gamma-labeled 32P-GTP (8 nM assay concentration), DMSO, or individual compounds (50 μM assay concentration) dissolved in DMSO with EDTA (20 mM). Filter binding was used to measure the amount of radiolabeled nucleotide incorporated after the reaction was halted by dilution into excess MgCl2. Nucleotide diphosphokinase changed 32P-GTP (alpha-labeled) into 32P-GDP, which was then utilized in the binding experiment with GDP.
Cell Assay In soft agar, anchorage-independent conditions are used to measure the compounds' growth inhibition of human lung cancer cells. 15,000 cells per well of 3.0 mL of 0.4% low-melting-point agarose containing different drug concentrations are seeded into 6-well plates (which have been coated with a base layer of 2.0 ml of 1% low-melting-point agarose). The cells are stained with 1.0 mg ml−1 nitroblue tetrazolium two to four weeks (depending on the cell line) after incubation, and colonies are counted under a microscope. When compared to the DMSO-treated control, the drug concentration that caused a 50% decrease in colony number is known as the IC50 value.
Animal Protocol
DMSO,50 mg/kg, i.p.
Mice bearing H358 xenografts
References

[1]. Discovery and characterization of small molecules that target the GTPase Ral. Nature. 2014 Nov 20;515(7527):443-7.


Solubility Data


Solubility (In Vitro)
DMSO: ≥ 40 mg/mL
Water: <1 mg/mL
Ethanol: <1 mg/mL
Solubility (In Vivo) Solubility in Formulation 1: ≥ 2.5 mg/mL (5.89 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 2.5 mg/mL (5.89 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 3: ≥ 2.5 mg/mL (5.89 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3560 mL 11.7800 mL 23.5599 mL
5 mM 0.4712 mL 2.3560 mL 4.7120 mL
10 mM 0.2356 mL 1.1780 mL 2.3560 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.