PeptideDB

PROTAC RIPK degrader-2 1801547-16-9

PROTAC RIPK degrader-2 1801547-16-9

CAS No.: 1801547-16-9

PROTAC RIPK degrader-2 is a von Hippel-Lindau-based non-peptide PROTAC that targets the serine-threonine kinase RIPK2 an
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This product is for research use only, not for human use. We do not sell to patients.

PROTAC RIPK degrader-2 is a von Hippel-Lindau-based non-peptide PROTAC that targets the serine-threonine kinase RIPK2 and is selective for the degradation of RIPK2.

Physicochemical Properties


Molecular Formula C52H65N7O11S3
Molecular Weight 1060.30780959129
Exact Mass 1059.39
CAS # 1801547-16-9
PubChem CID 91799297
Appearance Light yellow to yellow solid powder
LogP 5.9
Hydrogen Bond Donor Count 4
Hydrogen Bond Acceptor Count 17
Rotatable Bond Count 26
Heavy Atom Count 73
Complexity 1870
Defined Atom Stereocenter Count 3
SMILES

S(C1=CC2=C(C=CN=C2C=C1OCCOCCOCCOCCOCC(N[C@H](C(N1C[C@@H](C[C@H]1C(NCC1C=CC(C2=C(C)N=CS2)=CC=1)=O)O)=O)C(C)(C)C)=O)NC1C=CC2=C(C=1)N=CS2)(C(C)(C)C)(=O)=O

InChi Key RIEGJNXDHULIKM-GPPJZCFZSA-N
InChi Code

InChI=1S/C52H65N7O11S3/c1-33-47(72-31-55-33)35-10-8-34(9-11-35)28-54-49(62)42-25-37(60)29-59(42)50(63)48(51(2,3)4)58-46(61)30-69-21-20-67-17-16-66-18-19-68-22-23-70-43-27-40-38(26-45(43)73(64,65)52(5,6)7)39(14-15-53-40)57-36-12-13-44-41(24-36)56-32-71-44/h8-15,24,26-27,31-32,37,42,48,60H,16-23,25,28-30H2,1-7H3,(H,53,57)(H,54,62)(H,58,61)/t37-,42+,48-/m1/s1
Chemical Name

(2S,4R)-1-[(2S)-2-[[2-[2-[2-[2-[2-[4-(1,3-benzothiazol-5-ylamino)-6-tert-butylsulfonylquinolin-7-yl]oxyethoxy]ethoxy]ethoxy]ethoxy]acetyl]amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]pyrrolidine-2-carboxamide
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


Targets VHL
References

[1]. Catalytic in vivo protein knockdown by small-molecule PROTACs. Nat Chem Biol. 2015 Aug;11(8):611-7.

[2]. VHL-based PROTACs as potential therapeutic agents: Recent progress and perspectives. Eur J Med Chem. 2022 Jan 5;227:113906.


Solubility Data


Solubility (In Vitro) DMSO : 150 mg/mL (141.47 mM)
Solubility (In Vivo) Solubility in Formulation 1: ≥ 7.5 mg/mL (7.07 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 75.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 7.5 mg/mL (7.07 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 75.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.9431 mL 4.7156 mL 9.4312 mL
5 mM 0.1886 mL 0.9431 mL 1.8862 mL
10 mM 0.0943 mL 0.4716 mL 0.9431 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.