PeptideDB

PROTAC BRD4 Degrader-12 2417370-90-0

PROTAC BRD4 Degrader-12 2417370-90-0

CAS No.: 2417370-90-0

PROTAC BRD4 Degrader-12 (compound 9c) is a PROTAC consisting of a von Hippel-Lindau ligand linked to a BRD4 ligand. PROT
Sales Email:peptidedb@qq.com

This product is for research use only, not for human use. We do not sell to patients.

PROTAC BRD4 Degrader-12 (compound 9c) is a PROTAC consisting of a von Hippel-Lindau ligand linked to a BRD4 ligand. PROTAC BRD4 Degrader-12 can conjugate with STEAP1 and CLL1 antibodies to degrade BRD4 protein in PC3 prostate cancer cells with DC50s of 0.39 nM and 0.24 nM respectively.

Physicochemical Properties


Molecular Formula C62H77F2N9O12S4
Molecular Weight 1306.58469748497
Exact Mass 1305.454
CAS # 2417370-90-0
PubChem CID 162642591
Appearance White to light yellow solid powder
LogP 8.4
Hydrogen Bond Donor Count 4
Hydrogen Bond Acceptor Count 19
Rotatable Bond Count 29
Heavy Atom Count 89
Complexity 2730
Defined Atom Stereocenter Count 3
SMILES

S(C(C)C(C)OC(=O)O[C@H]1CN(C([C@H](C(C)(C)C)NC(CCCCCCCCCCNC(C2=CC3=C(C=C2CS(C)(=O)=O)C2=CN(C)C(C4=C2C(=CN4)CN3C2C(=CC(=CN=2)F)F)=O)=O)=O)=O)[C@H](C(NCC2C=CC(C3=C(C)N=CS3)=CC=2)=O)C1)S(C)(=O)=O

InChi Key RTGMFKZUBIYNLA-TXWUOVCNSA-N
InChi Code

InChI=1S/C62H77F2N9O12S4/c1-36-54(86-35-69-36)40-21-19-39(20-22-40)28-68-58(76)50-26-44(85-61(79)84-37(2)38(3)87-89(9,82)83)32-73(50)60(78)55(62(4,5)6)70-51(74)18-16-14-12-10-11-13-15-17-23-65-57(75)45-27-49-46(24-41(45)34-88(8,80)81)47-33-71(7)59(77)53-52(47)42(29-66-53)31-72(49)56-48(64)25-43(63)30-67-56/h19-22,24-25,27,29-30,33,35,37-38,44,50,55,66H,10-18,23,26,28,31-32,34H2,1-9H3,(H,65,75)(H,68,76)(H,70,74)/t37?,38?,44-,50+,55-/m1/s1
Chemical Name

[(3R,5S)-1-[(2S)-2-[11-[[8-(3,5-difluoropyridin-2-yl)-15-methyl-4-(methylsulfonylmethyl)-14-oxo-8,12,15-triazatetracyclo[8.6.1.02,7.013,17]heptadeca-1(16),2(7),3,5,10,13(17)-hexaene-5-carbonyl]amino]undecanoylamino]-3,3-dimethylbutanoyl]-5-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methylcarbamoyl]pyrrolidin-3-yl] 3-methylsulfonylsulfanylbutan-2-yl carbonate
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


References

[1]. Antibody-Mediated Delivery of Chimeric BRD4 Degraders. Part 2: Improvement of In Vitro Antiproliferation Activity and In Vivo Antitumor Efficacy. J Med Chem. 2021 Mar 11;64(5):2576-2607.


Solubility Data


Solubility (In Vitro) DMSO : 100 mg/mL (76.54 mM)
Solubility (In Vivo) Solubility in Formulation 1: 3.25 mg/mL (2.49 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 400 μL of PEG300 and mix evenly; then add 50 μL of Tween-80 to the above solution and mix evenly; then add 450 μL of normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 3.25 mg/mL (2.49 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.7654 mL 3.8268 mL 7.6535 mL
5 mM 0.1531 mL 0.7654 mL 1.5307 mL
10 mM 0.0765 mL 0.3827 mL 0.7654 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.