PeptideDB

Tat-NR2B9c TFA 1834571-04-8

Tat-NR2B9c TFA 1834571-04-8

CAS No.: 1834571-04-8

Tat-NR2B9c TFA (Tat-NR2Bct TFA) is an inhibitor (blocker/antagonist) of PSD-95, with EC50s of 6.7 nM and 670 nM for PSD-
Data collection:peptidedb@qq.com

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Tat-NR2B9c TFA (Tat-NR2Bct TFA) is an inhibitor (blocker/antagonist) of PSD-95, with EC50s of 6.7 nM and 670 nM for PSD-95d2 (PSD-95 PDZ domain 2) and PSD-95d1, respectively. Tat-NR2B9c TFA disrupts the PSD-95/NMDAR interaction and inhibits/disrupts the binding of PSD-95 to NR2A and NR2B with IC50s of 0.5 μM and 8 μM, respectively. Tat-NR2B9c TFA can also inhibit neuronal nitric oxide synthase (nNOS)/PSD-95 interaction and has neuro-protective (neuro-protection) effects.

Physicochemical Properties


Molecular Formula C107H189F3N42O32
Molecular Weight 2632.90299105644
Exact Mass 2518.451
CAS # 1834571-04-8
Related CAS # Tat-NR2B9c;500992-11-0
PubChem CID 44568939
Appearance White to off-white solid powder
LogP -19.3
Hydrogen Bond Donor Count 49
Hydrogen Bond Acceptor Count 40
Rotatable Bond Count 99
Heavy Atom Count 177
Complexity 5380
Defined Atom Stereocenter Count 20
SMILES

C(F)(F)(F)C(=O)O.[C@H](CCCNC(N)=N)(C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CO)C(=O)N[C@@H](CO)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H](C(=O)O)C(C)C)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CCC(=O)N)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCNC(N)=N)NC(=O)CNC(=O)[C@@H](N)CC1C=CC(O)=CC=1

InChi Key XWQVQFBTSBCKLI-FKXNDIMNSA-N
InChi Code

InChI=1S/C105H188N42O30/c1-7-55(6)80(98(175)140-69(34-36-77(154)155)92(169)143-72(50-148)95(172)142-71(48-78(156)157)94(171)146-79(54(4)5)99(176)177)147-97(174)74(52-150)145-96(173)73(51-149)144-93(170)70(46-53(2)3)141-90(167)62(22-10-13-39-108)133-85(162)63(24-15-41-124-101(113)114)135-87(164)65(26-17-43-126-103(117)118)136-88(165)66(27-18-44-127-104(119)120)138-91(168)68(33-35-75(110)152)139-89(166)67(28-19-45-128-105(121)122)137-86(163)64(25-16-42-125-102(115)116)134-84(161)61(21-9-12-38-107)132-83(160)60(20-8-11-37-106)131-82(159)59(23-14-40-123-100(111)112)130-76(153)49-129-81(158)58(109)47-56-29-31-57(151)32-30-56/h29-32,53-55,58-74,79-80,148-151H,7-28,33-52,106-109H2,1-6H3,(H2,110,152)(H,129,158)(H,130,153)(H,131,159)(H,132,160)(H,133,162)(H,134,161)(H,135,164)(H,136,165)(H,137,163)(H,138,168)(H,139,166)(H,140,175)(H,141,167)(H,142,172)(H,143,169)(H,144,170)(H,145,173)(H,146,171)(H,147,174)(H,154,155)(H,156,157)(H,176,177)(H4,111,112,123)(H4,113,114,124)(H4,115,116,125)(H4,117,118,126)(H4,119,120,127)(H4,121,122,128)/t55-,58-,59-,60-,61-,62-,63-,64-,65-,66-,67-,68-,69-,70-,71-,72-,73-,74-,79-,80-/m0/s1
Chemical Name

(4S)-4-[[(2S,3S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[2-[[(2S)-2-amino-3-(4-hydroxyphenyl)propanoyl]amino]acetyl]amino]-5-carbamimidamidopentanoyl]amino]hexanoyl]amino]hexanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-oxopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]hexanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]amino]-3-hydroxypropanoyl]amino]-3-methylpentanoyl]amino]-5-[[(2S)-1-[[(2S)-3-carboxy-1-[[(1S)-1-carboxy-2-methylpropyl]amino]-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-5-oxopentanoic acid
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


ln Vitro Tat-NR2B9c, a PSD-95 benchmark, exhibits domain affinity in comparison to PSD-95d1 (EC 50, 0.67 μM) with an EC50 of 6.7 nM for PSD-95d2. With an IC50 of 0.5 μM, approximately 8 μM, and 0.75 μM, respectively, Tat-NR2B9c inhibits the binding of NMDAR2A, NMDAR2B, and NMDAR2C to PSD-95. Moreover, Tat-NR2B9c, with an IC50 of around 0.2 μM, inhibits the PSD-95 and nNOS interaction [1]. While NMDA-induced p38 activation in YAC128 striatum is reduced by around 50% when Tat-NR2B9c lowers PSD-95 binding to GluN2B in YAC128 striatum, NMDA-induced JNK activation is unaffected [2].
ln Vivo Tat-NR2B9c (10 nmol/g, iv) did not affect infarct volume at 3 nmol/g, but it did diminish it with C57BL/6 nozzles [3].
References

[1]. PDZ protein interactions underlying NMDA receptor-mediated excitotoxicity and neuroprotection by PSD-95 inhibitors. J Neurosci. 2007 Sep 12;27(37):9901-15.

[2]. P38 MAPK is involved in enhanced NMDA receptor-dependent excitotoxicity in YAC transgenic mouse model of Huntington disease. Neurobiol Dis. 2012 Mar;45(3):999-1009.

Additional Infomation Na 1 is under investigation in clinical trial NCT00728182 (Evaluating Neuroprotection in Aneurysm Coiling Therapy).

Solubility Data


Solubility (In Vitro) H2O : ≥ 50 mg/mL (~18.99 mM)
Solubility (In Vivo) Solubility in Formulation 1: 100 mg/mL (37.98 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with sonication.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.3798 mL 1.8990 mL 3.7981 mL
5 mM 0.0760 mL 0.3798 mL 0.7596 mL
10 mM 0.0380 mL 0.1899 mL 0.3798 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.