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PHD2/HDACs-IN-1 2339867-53-5

PHD2/HDACs-IN-1 2339867-53-5

CAS No.: 2339867-53-5

PHD2/HDACs-IN-1 is a potent PHD2/HDACs mixed inhibitor (IC50 of PHD2 and HDAC1, HDAC2, and HDAC16 are 1.15 μM, 19.75 μ
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This product is for research use only, not for human use. We do not sell to patients.

PHD2/HDACs-IN-1 is a potent PHD2/HDACs mixed inhibitor (IC50 of PHD2 and HDAC1, HDAC2, and HDAC16 are 1.15 μM, 19.75 μM, 26.60 μM, and 15.98 μM, respectively). PHD2/HDACs-IN-1 is a low-toxicity nephroprotective agent that may be utilized to study cisplatin-induced acute kidney injury (AKI).

Physicochemical Properties


Molecular Formula C18H19N9O4
Molecular Weight 425.401361703873
Exact Mass 425.156
CAS # 2339867-53-5
PubChem CID 163322228
Appearance Typically exists as solid at room temperature
LogP -1.1
Hydrogen Bond Donor Count 4
Hydrogen Bond Acceptor Count 9
Rotatable Bond Count 5
Heavy Atom Count 31
Complexity 770
Defined Atom Stereocenter Count 0
InChi Key WXBFFCPFJFYHFX-UHFFFAOYSA-N
InChi Code

InChI=1S/C18H19N9O4/c28-14(25-31)11-8-19-17(20-9-11)26-6-2-12(3-7-26)23-15(29)13-10-21-18(24-16(13)30)27-5-1-4-22-27/h1,4-5,8-10,12,31H,2-3,6-7H2,(H,23,29)(H,25,28)(H,21,24,30)
Chemical Name

N-[1-[5-(hydroxycarbamoyl)pyrimidin-2-yl]piperidin-4-yl]-6-oxo-2-pyrazol-1-yl-1H-pyrimidine-5-carboxamide
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


ln Vitro In comparison to cisplatin treatment alone, combined treatment with PHD2/HDACs-IN-1 (compound 31c) (50 μM; 24 hours) can further reduce MCF7 and A549 cell viability [1]. Even at doses as high as 100 μM, PHD2/HDACs-IN-1 (0.78-100 μM; 24 hours) does not significantly affect HK-2 cell viability [1]. PHD2/HDACs-IN-1 (50 μM; 24 h) exhibits no discernible toxicity and possesses strong protective action against cisplatin-induced inhibition of normal renal tubular epithelial cells [1].
ln Vivo PHD2/HDACs-IN-1 (10 mg/kg/day; intraperitoneal injection; 2 days) has a substantial renal protective impact on lowering pathological damage and can greatly reduce renal tubular damage scores [1].
Cell Assay Cell viability assay
Cell Types: HK-2 cells [1]
Tested Concentrations: 0.78-100 μM
Incubation Duration: 24 hrs (hours)
Experimental Results: There was no significant inhibition on the viability of HK-2 cells when the dose was as high as 100 μM.
Animal Protocol Animal/Disease Models: Male C57BL/6 mice (8 weeks; n=5) (cisplatin-induced AKI) [1]
Doses: 10 mg/kg/day
Route of Administration: intraperitoneal (ip) injection, 2 days
Experimental Results: On reducing pathology Injury had a significant renoprotective effect with a significant reduction in tubular injury scores.
References

[1]. Novel PHD2/HDACs hybrid inhibitors protect against cisplatin-induced acute kidney injury. Eur J Med Chem. 2022;230:114115.


Solubility Data


Solubility (In Vitro) May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo) Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300:Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)

Oral Formulations Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders

Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3507 mL 11.7536 mL 23.5073 mL
5 mM 0.4701 mL 2.3507 mL 4.7015 mL
10 mM 0.2351 mL 1.1754 mL 2.3507 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.