PeptideDB

DiZPK 1337883-32-5

DiZPK 1337883-32-5

CAS No.: 1337883-32-5

DiZPK is novel photocrosslinking agent, revealing chaperone cooperation in acid resistance. DiZPK is photocrosslinking a
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DiZPK is novel photocrosslinking agent, revealing chaperone cooperation in acid resistance. DiZPK is photocrosslinking amino acid, could be significant in revealling the physiological and functions of some proteins acting as a genetically encoded.



Physicochemical Properties


Molecular Formula C12H23N5O3
Molecular Weight 285.34
Exact Mass 285.18
CAS # 1337883-32-5
Related CAS # DiZPK hydrochloride;2349295-23-2
PubChem CID 53314876
Appearance White to off-white solid powder
LogP 1.183
Hydrogen Bond Donor Count 4
Hydrogen Bond Acceptor Count 6
Rotatable Bond Count 10
Heavy Atom Count 20
Complexity 366
Defined Atom Stereocenter Count 1
SMILES

CC1(N=N1)CCCNC(=O)NCCCC[C@@H](C(=O)O)N

InChi Key YGUIFRMUMYTGAV-VIFPVBQESA-N
InChi Code

InChI=1S/C12H23N5O3/c1-12(16-17-12)6-4-8-15-11(20)14-7-3-2-5-9(13)10(18)19/h9H,2-8,13H2,1H3,(H,18,19)(H2,14,15,20)/t9-/m0/s1
Chemical Name

N6-((3-(3-Methyl-3H-diazirin-3-yl)propyl)carbamoyl)-L-lysine
Synonyms

DiZPK CS-4117 EBP 883 BMS 790052
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


ln Vitro In order to detect direct protein-protein interactions in living prokaryotic and eukaryotic cells, DiZPK, a structural analog of pyrrolysine (Pyl), functions as a photocross-linker [1].
References

[1]. A genetically incorporated crosslinker reveals chaperone cooperation in acid resistance. Nat Chem Biol. 2011 Sep 4;7(10):671-7.


Solubility Data


Solubility (In Vitro) H2O : ~5.2 mg/mL (~18.22 mM)
DMSO : ~5 mg/mL (~17.52 mM)
Solubility (In Vivo) Solubility in Formulation 1: 2 mg/mL (7.01 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with sonication.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5046 mL 17.5230 mL 35.0459 mL
5 mM 0.7009 mL 3.5046 mL 7.0092 mL
10 mM 0.3505 mL 1.7523 mL 3.5046 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.