PeptideDB

SLF TFA 2378802-47-0

SLF TFA 2378802-47-0

CAS No.: 2378802-47-0

SLF TFA is a synthetic ligand for FK506 binding protein (FKBP), with an affinity of 3.1 μM for FKBP51 and IC50 of 2.6
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SLF TFA is a synthetic ligand for FK506 binding protein (FKBP), with an affinity of 3.1 μM for FKBP51 and IC50 of 2.6 μM for FKBP12. It may be utilized to prepare PROTAC molecules.

Physicochemical Properties


Molecular Formula C32H41F3N2O8
Molecular Weight 638.671760320663
Exact Mass 638.281
CAS # 2378802-47-0
Related CAS # SLF;195513-96-3
Appearance Light brown to brown solid powder
SMILES

C(F)(F)(F)C(=O)O.C(N1CCCC[C@H]1C(=O)O[C@@H](C1C=CC=C(N)C=1)CCC1C=CC(OC)=C(OC)C=1)(=O)C(=O)C(C)(C)CC

InChi Key HKRBJXCFMLSYKV-KZDWWKKTSA-N
InChi Code

InChI=1S/C30H40N2O6.C2HF3O2/c1-6-30(2,3)27(33)28(34)32-17-8-7-12-23(32)29(35)38-24(21-10-9-11-22(31)19-21)15-13-20-14-16-25(36-4)26(18-20)37-5;3-2(4,5)1(6)7/h9-11,14,16,18-19,23-24H,6-8,12-13,15,17,31H2,1-5H3;(H,6,7)/t23-,24+;/m0./s1
Chemical Name

[(1R)-1-(3-aminophenyl)-3-(3,4-dimethoxyphenyl)propyl] (2S)-1-(3,3-dimethyl-2-oxopentanoyl)piperidine-2-carboxylate;2,2,2-trifluoroacetic acid
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


ln Vitro Three segments (KB02, KB03, and KB05) show significant cysteine coverage with SLF ligands in the human proteome, when fused together, covering two distinct electrophilic groups (acrylamide and chloroacetamide). This ligand is reactive and specifically binds to FKBP12, a cytosolic prolyl isomerase that is widely employed in research on the degradation of proteins induced by ligands [3].
References

[1]. FKBP Ligands-Where We Are and Where to Go? Front Pharmacol. 2018 Dec 5;9:1425.

[2]. Creating diverse target-binding surfaces on FKBP12: synthesis and evaluation of a rapamycin analogue library. ACS Comb Sci. 2011 Sep 12;13(5):486-95.

[3]. Electrophilic PROTACs that degrade nuclear proteins by engaging DCAF16. Nat Chem Biol. 2019 Jul;15(7):737-746.


Solubility Data


Solubility (In Vitro) DMSO : 100 mg/mL (156.58 mM)
Solubility (In Vivo) Solubility in Formulation 1: 5 mg/mL (7.83 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 50.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.5658 mL 7.8288 mL 15.6575 mL
5 mM 0.3132 mL 1.5658 mL 3.1315 mL
10 mM 0.1566 mL 0.7829 mL 1.5658 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.