PeptideDB

SCR130 2377858-38-1

SCR130 2377858-38-1

CAS No.: 2377858-38-1

SCR130 is a SCR7-based inhibitor of DNA nonhomologous end joining (NHEJ). SCR130 inhibits DNA end joining in a ligase IV
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SCR130 is a SCR7-based inhibitor of DNA nonhomologous end joining (NHEJ). SCR130 inhibits DNA end joining in a ligase IV-dependent manner. SCR130 is specific for ligase IV and has little or no effect on ligation mediated by ligase III and ligase I. SCR130 causes apoptosis and has anti-neoplastic activity.

Physicochemical Properties


Molecular Formula C19H13CL2N3O2S
Molecular Weight 418.296420812607
Exact Mass 417.01
CAS # 2377858-38-1
PubChem CID 146165950
Appearance Light yellow to brown solid powder
LogP 3.6
Hydrogen Bond Donor Count 2
Hydrogen Bond Acceptor Count 4
Rotatable Bond Count 2
Heavy Atom Count 27
Complexity 662
Defined Atom Stereocenter Count 0
SMILES

ClC1C=CC(=CC=1)C1CC(C2C=CC(=CC=2)Cl)=NC21C(NC(NC2=O)=S)=O

InChi Key QEMQLCCYJLGAKB-UHFFFAOYSA-N
InChi Code

InChI=1S/C19H13Cl2N3O2S/c20-12-5-1-10(2-6-12)14-9-15(11-3-7-13(21)8-4-11)24-19(14)16(25)22-18(27)23-17(19)26/h1-8,14H,9H2,(H2,22,23,25,26,27)
Chemical Name

2,4-bis(4-chlorophenyl)-8-sulfanylidene-1,7,9-triazaspiro[4.5]dec-1-ene-6,10-dione
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


ln Vitro SCR130 (7-21 μM; 48 hours) increases in both early and late apoptotic cell counts. Through both internal and external routes, SCR130 causes apoptosis. p-p53, BCL2, and MCL1 expression are all upregulated by SCR130, along with CYTOCHROME C, BAX, and BAK. Increased expression of the FAS and SMAC-DIABLO proteins, as well as caspase 8 activation, have been reported[1]. The IC50 values of SCR130 (48 hours) in Reh, HeLa, CEM, Nalm6, and N114 cells are 14.1 μM, 5.9 μM, 6.5 μM, 2.2 μM, and 11 μM, respectively. These results indicate that SCR130 is cytotoxic]. By causing increased cell death when co-administered in Reh and Nalm6 cell lines, SCR130 can magnify the effects of radiation (0.5 and 1 Gy)[1]. Unrepaired DNA breaks accumulate when SCR130 inhibits the endogenous NHEJ. DNA double-strand breaks (DSBs) accumulate as a result of treatment with SCR130, which inhibits endogenous NHEJ and triggers apoptotic pathways, ultimately leading to cell death[1].
Cell Assay Apoptosis Analysis[1]
Cell Types: Reh cells
Tested Concentrations: 7 μM, 14 μM, and 21 μM
Incubation Duration: 48 hrs (hours)
Experimental Results: demonstrated a concentration-dependent increase in the number of late and early apoptotic cells.

Western Blot Analysis[1]
Cell Types: Reh cells
Tested Concentrations: 7 μM, 14 μM, and 21 μM
Incubation Duration: 48 hrs (hours)
Experimental Results: Revealed a concentration-dependent increase in levels of pATM and activation of p53 through phosphorylation.
References

[1]. Identification and characterization of novel SCR7-based small-molecule inhibitor of DNA end-joining, SCR130 and its relevance in cancer therapeutics. Mol Carcinog. 2020 Jun;59(6):618-628.


Solubility Data


Solubility (In Vitro) DMSO : 100 mg/mL (239.06 mM )
Solubility (In Vivo) Solubility in Formulation 1: ≥ 2.5 mg/mL (5.98 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3906 mL 11.9531 mL 23.9063 mL
5 mM 0.4781 mL 2.3906 mL 4.7813 mL
10 mM 0.2391 mL 1.1953 mL 2.3906 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.