Nutlin-3b, a less active/inactive isomer of nutlin-3, is a novel antagonist or inhibitor of p53/MDM2 (murine double minute 2) protein protein interaction with IC50 value of 13.6 μM. Compared to Nutlin-3a, it is 150 times less potent.
Physicochemical Properties
Molecular Formula | C30H30CL2N4O4 |
Molecular Weight | 581.49 |
Exact Mass | 580.164 |
Elemental Analysis | C, 61.97; H, 5.20; Cl, 12.19; N, 9.64; O, 11.01 |
CAS # | 675576-97-3 |
Related CAS # | Nutlin-3a;675576-98-4;Nutlin-3;548472-68-0 |
PubChem CID | 16755649 |
Appearance | Off-white to yellow solid powder |
Density | 1.4±0.1 g/cm3 |
Index of Refraction | 1.648 |
LogP | 2.77 |
Hydrogen Bond Donor Count | 1 |
Hydrogen Bond Acceptor Count | 5 |
Rotatable Bond Count | 6 |
Heavy Atom Count | 40 |
Complexity | 919 |
Defined Atom Stereocenter Count | 2 |
SMILES | O=C1NCCN(C(N2[C@@H](C3=CC=C(Cl)C=C3)[C@@H](C4=CC=C(Cl)C=C4)N=C2C5=CC=C(OC)C=C5OC(C)C)=O)C1 |
InChi Key | BDUHCSBCVGXTJM-IZLXSDGUSA-N |
InChi Code | InChI=1S/C30H30Cl2N4O4/c1-18(2)40-25-16-23(39-3)12-13-24(25)29-34-27(19-4-8-21(31)9-5-19)28(20-6-10-22(32)11-7-20)36(29)30(38)35-15-14-33-26(37)17-35/h4-13,16,18,27-28H,14-15,17H2,1-3H3,(H,33,37)/t27-,28+/m1/s1 |
Chemical Name | 4-[(4R,5S)-4,5-bis(4-chlorophenyl)-2-(4-methoxy-2-propan-2-yloxyphenyl)-4,5-dihydroimidazole-1-carbonyl]piperazin-2-one |
Synonyms | (+)-Nutlin-3; Nutlin 3b; Nutlin-3b; Nutlin3b |
HS Tariff Code | 2934.99.9001 |
Storage |
Powder-20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
Shipping Condition | Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs) |
Biological Activity
Targets | MDM2/p53 (IC50 = 13.6 μg/mL) | |
ln Vitro |
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ln Vivo |
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Cell Assay | On a Biacore S51, competition assay is conducted. An immobilized PentaHis antibody is used to capture the His-tagged p53 on a Series S Sensor chip CM5. A response unit equals one pg of protein per millimeter 2, so the level of capture is around 200. MDM2 protein is kept at a constant 300 nM concentration. Each MDM2 test sample contains a concentration series of Nutlin-3 after it has been dissolved in DMSO at a 10 mM concentration and further diluted. Running buffer (10 mM Hepes, 0.15 M NaCl, 2% DMSO) is used for the assay, which is carried out at 25 °C. Calculating IC50 involves calculating the percentage of MDM2-p53 binding in the presence of Nutlin-3 compared to binding in the absence of Nutlin-3. | |
Animal Protocol |
HCT116, RKO, SJSA-1, SW480, and MDA-MB-435 ~30 μM; 48 h MTT assay |
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References |
[1]. In vivo activation of the p53 pathway by small-molecule antagonists of MDM2. Science. 2004 Feb 6;303(5659):844-8. |
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Additional Infomation |
Nutlin-3 is a Nutlin and a piperazinone. It has a role as an anticoronaviral agent. Nutlin-3 is a small molecule inhibitor that targets p53-Mdm2 interaction. |
Solubility Data
Solubility (In Vitro) |
DMSO: ~100 mg/mL (~172.0 mM) Water: <1 mg/mL (slightly soluble or insoluble) Ethanol: ~100 mg/mL (~172.0 mM) |
Solubility (In Vivo) |
Solubility in Formulation 1: ≥ 2.5 mg/mL (4.30 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL. Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution. Solubility in Formulation 2: ≥ 2.5 mg/mL (4.30 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.  (Please use freshly prepared in vivo formulations for optimal results.) |
Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
1 mM | 1.7197 mL | 8.5986 mL | 17.1972 mL | |
5 mM | 0.3439 mL | 1.7197 mL | 3.4394 mL | |
10 mM | 0.1720 mL | 0.8599 mL | 1.7197 mL |