PeptideDB

Nitidanin ((±)-Nitidanin) 171674-89-8

Nitidanin ((±)-Nitidanin) 171674-89-8

CAS No.: 171674-89-8

Nitidanin ((±)-Nitidanin) is an antimalarial and antiviral compound extracted from the wood of Xanthoxylum nitidun DC.
Data collection:peptidedb@qq.com

This product is for research use only, not for human use. We do not sell to patients.

Nitidanin ((±)-Nitidanin) is an antimalarial and antiviral compound extracted from the wood of Xanthoxylum nitidun DC. The IC50s of Nitidanin against P. falciparum D6 and W2 clones were 21.2 and 18.4 μM, respectively. Nitidanin may be utilized in the research of malaria and viral infections.

Physicochemical Properties


Molecular Formula C21H24O8
Molecular Weight 404.41
Exact Mass 404.147
CAS # 171674-89-8
PubChem CID 10501396
Appearance Typically exists as solid at room temperature
Density 1.3±0.1 g/cm3
Boiling Point 622.2±55.0 °C at 760 mmHg
Flash Point 330.1±31.5 °C
Vapour Pressure 0.0±1.9 mmHg at 25°C
Index of Refraction 1.607
LogP 0.56
Hydrogen Bond Donor Count 3
Hydrogen Bond Acceptor Count 8
Rotatable Bond Count 7
Heavy Atom Count 29
Complexity 515
Defined Atom Stereocenter Count 2
SMILES

OC/C=C/C1C=C(OC)C2=C(OC(C3=CC(OC)=C(O)C(OC)=C3)C(CO)O2)C=1

InChi Key AZTAGXIJLPKJOR-SRXMEYSWSA-N
InChi Code

InChI=1S/C21H24O8/c1-25-14-9-13(10-15(26-2)19(14)24)20-18(11-23)29-21-16(27-3)7-12(5-4-6-22)8-17(21)28-20/h4-5,7-10,18,20,22-24H,6,11H2,1-3H3/b5-4+/t18-,20-/m1/s1
Chemical Name

4-[(2R,3R)-3-(hydroxymethyl)-7-[(E)-3-hydroxyprop-1-enyl]-5-methoxy-2,3-dihydro-1,4-benzodioxin-2-yl]-2,6-dimethoxyphenol
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


Targets Plasmodium
ln Vitro Plasmodium falciparum clones D6 and W2 are inhibited by nitidanin, with IC50 values of 21.2 and 18.4 μM, respectively [1]. Human oral epidermoid carcinoma cells (KB) with an EC50 value >99 μM respond non-cytotoxically to nitidanin [1]. Nitidanin's CC50 value of 464.4 μM indicates that it has a minimal cytotoxic effect on human liver cancer Huh7.5.1 cells [2]. With an IC50 value of 200 μM, nitidanin (0-250 μM; 5 hours) demonstrates anti-HCV efficacy [2].
References

[1]. Antimalarial compounds from Grewia bilamellata. J Nat Prod. 2006 Mar;69(3):346-50.

[2]. 1,4-Benzodioxane Lignans: An Efficient, Asymmetric Synthesis of Flavonolignans and Study of Neolignan Cytotoxicity and Antiviral Profiles. J Nat Prod. 2018 Dec 28;81(12):2630-2637.

Additional Infomation Nitidanin has been reported in Zanthoxylum nitidum with data available.

Solubility Data


Solubility (In Vitro) May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo) Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300:Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)

Oral Formulations Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders

Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.4727 mL 12.3637 mL 24.7274 mL
5 mM 0.4945 mL 2.4727 mL 4.9455 mL
10 mM 0.2473 mL 1.2364 mL 2.4727 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.