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N4-Acetyl-2'-O-methylcytidine 113886-71-8

N4-Acetyl-2'-O-methylcytidine 113886-71-8

CAS No.: 113886-71-8

N4-Acetyl-2'-O-methylcytidine (ac4Cm) is a dually modified RNA with acetylation and methoxylation, which exists in therm
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N4-Acetyl-2'-O-methylcytidine (ac4Cm) is a dually modified RNA with acetylation and methoxylation, which exists in thermophilic archaea. N4-Acetyl-2'-O-methylcytidine is related to the adaptability of archaea in extreme environments and enhances the stability of RNA through dual modification.

Physicochemical Properties


Molecular Formula C12H17N3O6
Molecular Weight 299.28
CAS # 113886-71-8
Appearance Solid powder
SMILES

O1[C@]([H])(C([H])([H])O[H])[C@]([H])([C@]([H])([C@]1([H])N1C(N=C(C([H])=C1[H])N([H])C(C([H])([H])[H])=O)=O)OC([H])([H])[H])O[H]

Synonyms

N4-Acetyl-2'-methoxycytidine
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


References

[1]. Thomas J M, Bryson K M, Meier J L. Nucleotide resolution sequencing of N4-acetylcytidine in RNAM//Methods in enzymology. Academic Press, 2019, 621: 31-51.


Solubility Data


Solubility (In Vitro) DMSO : ~100 mg/mL (~334.14 mM; with ultrasonication)
Solubility (In Vivo) Solubility in Formulation 1: ≥ 2.5 mg/mL (8.35 mM)(saturation unknown) in 10% DMSO 40% PEG300 5% Tween-80 45% Saline (add these co-solvents sequentially from left to right, and one by one),clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution and add it to 400 μL PEG300, mix well; then add 50 μL Tween-80 to the above system, mix well; then continue to add 450 μL of normal saline to make up to 1 mL. Preparation of normal saline: Dissolve 0.9 g of sodium chloride in ddH₂O and make up to 100 mL to obtain a clear and transparent normal saline solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (8.35 mM)(saturation unknown) in 10% DMSO 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one),clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution and add it to 900 μL of 20% SBE-β-CD saline solution and mix well. 2 g SBE-β-CD (sulfobutyl ether β-cyclodextrin) powder is diluted to 10 mL of saline and completely dissolved until clear and transparent.

Solubility in Formulation 3: ≥ 2.5 mg/mL (8.35 mM)(saturation unknown) in 10% DMSO 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one),clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution and add it to 900 μL corn oil and mix well.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.3414 mL 16.7068 mL 33.4135 mL
5 mM 0.6683 mL 3.3414 mL 6.6827 mL
10 mM 0.3341 mL 1.6707 mL 3.3414 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.