MSC2530818 is novel, potent, selective and orally available small molecule inhibitor of cyclin dependent kinase CDK8 with the IC50 of 2.6 nM. It has good kinase selectivity, high biochemical and cellular potency, microsomal stability, and a respectable oral bioavailability, among other excellent pharmacokinetic and pharmacodynamic properties. After WNT signaling is activated, β-catenin-dependent transcription is regulated by the mediator complex-associated cyclin-dependent kinase CDK8. Several lines of evidence imply that CDK8 may function as an oncogene during the course of colorectal cancer development. Following a high-throughput screening campaign, MSC2530818 was discovered and advanced through structure-based design. MSC2530818 showed enough potency and selectivity to move forward with preclinical in vivo safety and efficacy investigations.
Physicochemical Properties
Molecular Formula | C18H17CLN4O | |
Molecular Weight | 340.8068 | |
Exact Mass | 340.11 | |
Elemental Analysis | C, 63.44; H, 5.03; Cl, 10.40; N, 16.44; O, 4.69 | |
CAS # | 1883423-59-3 | |
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PubChem CID | 118879529 | |
Appearance | White to off-white solid powder | |
LogP | 3.3 | |
Hydrogen Bond Donor Count | 1 | |
Hydrogen Bond Acceptor Count | 3 | |
Rotatable Bond Count | 2 | |
Heavy Atom Count | 24 | |
Complexity | 468 | |
Defined Atom Stereocenter Count | 1 | |
SMILES | CC1=C2C=C(C=NC2=NN1)C(=O)N3CCC[C@H]3C4=CC=C(C=C4)Cl |
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InChi Key | ODRITQGYYWHQGM-INIZCTEOSA-N | |
InChi Code | InChI=1S/C18H17ClN4O/c1-11-15-9-13(10-20-17(15)22-21-11)18(24)23-8-2-3-16(23)12-4-6-14(19)7-5-12/h4-7,9-10,16H,2-3,8H2,1H3,(H,20,21,22)/t16-/m0/s1 | |
Chemical Name | [(2S)-2-(4-chlorophenyl)pyrrolidin-1-yl]-(3-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)methanone | |
Synonyms |
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HS Tariff Code | 2934.99.9001 | |
Storage |
Powder-20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
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Shipping Condition | Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs) |
Biological Activity
Targets | CDK8 (IC50 = 2.6 nM) | ||
ln Vitro |
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ln Vivo |
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Enzyme Assay | Having an IC50 of 2.6 nM, MSC2530818 is a new, potent, selective, and oral small molecule inhibitor of cyclin-dependent kinase CDK8. | ||
Cell Assay | In human cancer cell lines that have constitutively activated WNT signaling, SC2530818 exhibits strong suppression of WNT-dependent transcription. For instance, MSC2530818 inhibits the reporter-based luciferase readout in a number of cell lines carrying activating mutations in the WNT pathway, such as LS174T (a β-catenin mutant with an IC50 of 32±7 nM) and COLO205 (an APC mutant with an IC50 of 9±1 nM).It also shows inhibition of the WNT3a ligand-dependent reporter readout in PA-1 cells (IC50=52±30 nM). MSC2530818 shows minimal hERG inhibition and minimal activity in the CEREP panel. It is the only compound with activity below 10 μM, with an IC50 of 8.5 μM on the dopamine transporter. Additionally, MSC2530818 does not inhibit any cytochrome P450 subtypes and is a soluble CDK8 inhibitor with high permeability and low efflux ratio in Caco-2 cells. | ||
Animal Protocol |
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References |
[1]. J Med Chem . 2016 Oct 27;59(20):9337-9349. [2]. Cell Stem Cell . 2021 Jun 3;28(6):1105-1124.e19. |
Solubility Data
Solubility (In Vitro) |
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Solubility (In Vivo) |
Solubility in Formulation 1: ≥ 2.75 mg/mL (8.07 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 27.5 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL. Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution. Solubility in Formulation 2: 2.75 mg/mL (8.07 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 27.5 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly. Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution. Solubility in Formulation 3: ≥ 2.75 mg/mL (8.07 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 27.5 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.  (Please use freshly prepared in vivo formulations for optimal results.) |
Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
1 mM | 2.9342 mL | 14.6709 mL | 29.3419 mL | |
5 mM | 0.5868 mL | 2.9342 mL | 5.8684 mL | |
10 mM | 0.2934 mL | 1.4671 mL | 2.9342 mL |