PeptideDB

ERCC1-XPF-IN-2 1808986-37-9

ERCC1-XPF-IN-2 1808986-37-9

CAS No.: 1808986-37-9

ERCC1-XPF-IN-2 is a potent ERCC1-XPF endonuclease inhibitor (antagonist) with IC50 of 0.6 µM. ERCC1-XPF-IN-2 showed act
Data collection:peptidedb@qq.com

This product is for research use only, not for human use. We do not sell to patients.

ERCC1-XPF-IN-2 is a potent ERCC1-XPF endonuclease inhibitor (antagonist) with IC50 of 0.6 µM. ERCC1-XPF-IN-2 showed activity in nucleotide excision repair, cisplatin enhancement, and γH2AX assays.

Physicochemical Properties


Molecular Formula C15H13CL2NO3
Molecular Weight 326.174622297287
Exact Mass 325.027
CAS # 1808986-37-9
PubChem CID 122189958
Appearance White to off-white solid powder
LogP 3.2
Hydrogen Bond Donor Count 3
Hydrogen Bond Acceptor Count 3
Rotatable Bond Count 4
Heavy Atom Count 21
Complexity 356
Defined Atom Stereocenter Count 0
SMILES

C(C1C=CC(Cl)=CC=1Cl)C(=O)NCC1C=CC(O)=C(O)C=1

InChi Key BKPCQXGBKRAJDW-UHFFFAOYSA-N
InChi Code

InChI=1S/C15H13Cl2NO3/c16-11-3-2-10(12(17)7-11)6-15(21)18-8-9-1-4-13(19)14(20)5-9/h1-5,7,19-20H,6,8H2,(H,18,21)
Chemical Name

2-(2,4-dichlorophenyl)-N-[(3,4-dihydroxyphenyl)methyl]acetamide
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


ln Vitro ERCC1-XPF-IN-2 (compound 13) (0-100 µM) has DNase I and FEN-1 activity with IC50 values >100 and >100 µM, respectively [1]. The binding kinetics of ERCC1-XPF-IN-2 are sluggish, with a Kd value of about 30 µM [1]. Hep-G2 cells are not affected by ERCC1-XPF-IN-2 at concentrations up to 10 µM. Mice and humans have relatively short half-lives (t1/2 values of 23 minutes and 28 minutes, respectively) for their microsomes. Nucleotide excision repair (NER) in A375 cells is inhibited by ERCC1-XPF-IN-2 (0-60 µM; 24 h) with an IC50 value of 15.6 µM [1]. Without causing toxicity, ERCC1-XPF-IN-2 (0-60 µM) boosts cisplatin action [1]. Delays in DNA repair are caused by ERCC1-XPF-IN-2 (10 µM; 6h), which right-shifts more γH2AX foci per cell [1].
Cell Assay Cytotoxicity Assay[1]
Cell Types: A375 Cell
Tested Concentrations: 0-60 µM
Incubation Duration:
Experimental Results: Did not show any toxicity and increased cisplatin activity to 1.5 times (PF50).
References

[1]. Catechols and 3-hydroxypyridones as inhibitors of the DNA repair complex ERCC1-XPF. Bioorg Med Chem Lett. 2015 Oct 1;25(19):4097-103.


Solubility Data


Solubility (In Vitro) DMSO : ≥ 250 mg/mL (~766.47 mM)
Solubility (In Vivo) Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300:Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)

Oral Formulations Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders

Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.0659 mL 15.3294 mL 30.6589 mL
5 mM 0.6132 mL 3.0659 mL 6.1318 mL
10 mM 0.3066 mL 1.5329 mL 3.0659 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.