Physicochemical Properties
| Molecular Formula | C24H34N8O7S |
| Molecular Weight | 578.64 |
| Exact Mass | 578.227 |
| CAS # | 862772-11-0 |
| Related CAS # | Cyclo(Arg-Gly-Asp-D-Phe-Cys) TFA |
| PubChem CID | 11330668 |
| Appearance | White to off-white solid powder |
| LogP | -2.2 |
| Hydrogen Bond Donor Count | 9 |
| Hydrogen Bond Acceptor Count | 9 |
| Rotatable Bond Count | 9 |
| Heavy Atom Count | 40 |
| Complexity | 969 |
| Defined Atom Stereocenter Count | 4 |
| SMILES | C1C(=O)N[C@H](C(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N1)CCCN=C(N)N)CS)CC2=CC=CC=C2)CC(=O)O |
| InChi Key | WNYJVAMZRBTOPE-YVSFHVDLSA-N |
| InChi Code | InChI=1S/C24H34N8O7S/c25-24(26)27-8-4-7-14-20(36)28-11-18(33)29-16(10-19(34)35)22(38)31-15(9-13-5-2-1-3-6-13)21(37)32-17(12-40)23(39)30-14/h1-3,5-6,14-17,40H,4,7-12H2,(H,28,36)(H,29,33)(H,30,39)(H,31,38)(H,32,37)(H,34,35)(H4,25,26,27)/t14-,15+,16-,17-/m0/s1 |
| Chemical Name | 2-[(2S,5R,8R,11S)-5-benzyl-11-[3-(diaminomethylideneamino)propyl]-3,6,9,12,15-pentaoxo-8-(sulfanylmethyl)-1,4,7,10,13-pentazacyclopentadec-2-yl]acetic acid |
| HS Tariff Code | 2934.99.9001 |
| Storage |
Powder-20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light. |
| Shipping Condition | Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs) |
Biological Activity
| Targets | αvβ3 |
| ln Vitro | Cyclo(Arg-Gly-Asp-D-Phe-Cys) (0.5 mM; 24 h) reduces the expression of Oct 4, Sox 2, and Nanog, three mESC transcription factors [1]. Inhibiting integrin gene expression in the mESC-col I (type I collagen) construct is Cyclo(Arg-Gly-Asp-D-Phe-Cys) (0.5 mM) [1]. Cyclo(Arg-Gly-Asp-D-Phe-Cys) (0.5 mM) treatment caused mESCs to cluster and separate from the surface [1]. |
| ln Vivo | In either scenario, leukemia inhibitory factor (LIF) (injection in both legs) (SCID) mice treated with cyclo(Arg-Gly-Asp-D-Phe-Cys) (0.5 mM, 24 h)-treated mESCs do not cause teratomas, indicating that integrin interactions are necessary for the process of mESC tumor formation in vivo [1]. |
| Cell Assay |
RT-PCR[1] Cell Types: MESCs Tested Concentrations: 0.5 mM Incubation Duration: 24 h Experimental Results: Down-regulated Oct 4, Nanog, Sox 2 by 99%, 97.5%, and 90% respectively. |
| References |
[1]. Reduction of pluripotent gene expression in murine embryonic stem cells exposed to mechanical loading or Cyclo RGD peptide. BMC Cell Biol. 2017 Nov 14;18(1):32. |
Solubility Data
| Solubility (In Vitro) | DMSO : 50 mg/mL (86.41 mM) |
| Solubility (In Vivo) |
Solubility in Formulation 1: ≥ 2.5 mg/mL (4.32 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL. Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution. Solubility in Formulation 2: ≥ 2.5 mg/mL (4.32 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly. Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution. Solubility in Formulation 3: ≥ 2.5 mg/mL (4.32 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.  (Please use freshly prepared in vivo formulations for optimal results.) |
| Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
| 1 mM | 1.7282 mL | 8.6410 mL | 17.2819 mL | |
| 5 mM | 0.3456 mL | 1.7282 mL | 3.4564 mL | |
| 10 mM | 0.1728 mL | 0.8641 mL | 1.7282 mL |