 Chemical Structure.png)
Physicochemical Properties
| Molecular Formula | C28H38N2O6 |
| Exact Mass | 498.273 |
| Elemental Analysis | C, 67.45; H, 7.68; N, 5.62; O, 19.25 |
| CAS # | 72263-05-9 |
| PubChem CID | 6440452 |
| Appearance | White to off-white solid powder |
| Density | 1.06 g/cm3 |
| Boiling Point | 673.4ºC at 760 mmHg |
| Flash Point | 361.1ºC |
| Index of Refraction | 1.484 |
| LogP | 5.502 |
| Hydrogen Bond Donor Count | 0 |
| Hydrogen Bond Acceptor Count | 8 |
| Rotatable Bond Count | 4 |
| Heavy Atom Count | 36 |
| Complexity | 746 |
| Defined Atom Stereocenter Count | 6 |
| SMILES | C[C@H]1/C=C(\C(=O)O[C@H]([C@H](C[C@H](/C=C(\C(=O)O[C@H]([C@H](C1)C)CC2=CN=CO2)/C)C)C)CC3=CN=CO3)/C |
| InChi Key | LAJRJVDLKYGLOO-NLISZJEWSA-N |
| InChi Code | InChI=1S/C28H38N2O6/c1-17-7-19(3)25(11-23-13-29-15-33-23)35-28(32)22(6)10-18(2)8-20(4)26(12-24-14-30-16-34-24)36-27(31)21(5)9-17/h9-10,13-20,25-26H,7-8,11-12H2,1-6H3/b21-9-,22-10-/t17-,18-,19+,20+,25+,26+/m1/s1 |
| Chemical Name | (3Z,5R,7S,8S,11Z,13R,15S,16S)-3,5,7,11,13,15-hexamethyl-8,16-bis(1,3-oxazol-5-ylmethyl)-1,9-dioxacyclohexadeca-3,11-diene-2,10-dione |
| Synonyms | 72263-05-9; 3,5,7,11,13,15-Hexamethyl-8,16-bis(1,3-oxazol-5-ylmethyl)-1,9-dioxacyclohexadeca-3,11-diene-2,10-dione; (3E,5R,11E)-3,5,7S,11,13R,15S-hexamethyl-8S,16S-bis(5-oxazolylmethyl)-1,9-dioxacyclohexadeca-3,11-diene-2,10-dione |
| HS Tariff Code | 2934.99.9001 |
| Storage |
Powder-20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
| Shipping Condition | Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs) |
Biological Activity
| Targets | HSP90 |
| ln Vitro |
Conglobatin 6.25-100 μM; 48 h) significantly inhibits the proliferation of MCF-7 and SKBR3 cells with IC50s of 12.11 and 39.44 μM, respectively[2]. EC109, KYSE70, KYSE450, KYSE150, KYSE180, and KYSE510 cells exhibit inhibited cell proliferation in response to conglobatin, with IC50 values of 16.43, 15.89, 10.94, 10.50, 10.28, and 9.31 μM, respectively[3]. SKBR3 and MCF-7 cells exhibit a clear G2/M phase arrest when exposed to conglobatin (10–40 μM) for a 24-hour period. Conglobatin causes SKBR3 and MCF-7 cells to undergo apoptosis via caspase-dependent mechanisms[2]. Hsp90 client protein levels are decreased and proteasome-dependent degradation is induced by conglobatin (10–40 μM; 3–24 h)[2]. binds to Hsp90's N-terminal, inhibiting Hsp90/Cdc37 chaperone/co-chaperone interactions but having no effect on Hsp90's ability to bind ATP[2]. FW-04-806 binds to the N-terminal of Hsp90. FW-04-806 does not affect ATP-binding capability of Hsp90, but inhibits Hsp90/Cdc37 chaperone/co-chaperone interactions. FW-04-806 decreases Hsp90 client protein levels and induces proteasome-dependent degradation. FW-04-806 inhibits growth, induces cell cycle arrest, induces apoptosis, and downregulates the expression of anti-apoptotic proteins.[2] |
| ln Vivo |
In SKBR3 and MCF-7 human breast cancer xenograft models, conglobatin (50-200 mg/kg; ig q3d for 24 d) dose-dependently suppresses the growth of tumors[2]. In low-toxicity tumor xenograft models, EC109 and KYSE510, conglobatin (4–8 mg/kg; intraperitoneally every day for 21 days) suppresses the growth of tumors.[3] FW-04-806 inhibits the tumor growth of SKBR3 and MCF-7 tumor xenograft models [2] SKBR3 and MCF-7 human breast cancer xenografts were established to assess the chemotherapeutic potential of FW-04-806. The antitumor activity of FW-04-806 at three doses (50, 100, and 200 mg/kg per dose i.g., q3d) were determined. ADM (4 mg/kg per dose i.p., q3d) was used as a positive control. The results demonstrated that FW-04-806 inhibited tumor growth in the SKBR3 and MCF-7 xenograft models in a dose-dependent manner (Figure 5A and B). Compared with the vehicle group, the three increasing doses of FW-04-806 showed, respectively, inhibition of tumor growth at a rate of 39.1% (P = 0.009), 52.7% (P = 0.003), and 67.5% (P = 0.0007) in the SKBR3 cell line groups and 27.3% (P = 0.021), 39.8% (P = 0.004), 54.3% (P = 0.001) in the MCF-7 cell line groups. Notably, the antitumor activity of high-dose FW-04-806 (0.37 ± 0.04 g, 67.5%) was better than positive control group(0.39 ± 0.04 g, 64.9%, P = 0.0008).All animals survived FW-04-806 treatment without appreciable adverse effects in terms of body weight loss or other signs of toxicity during the treatment (Figure 5C and D). Liver and renal function was similar between FW-04-806-treated and control mice. Additionally, lung, liver, heart, and kidneys of mice showed no histological abnormalities at the end of drug treatment (data not shown). This outcome demonstrates that FW-04-806 was well tolerated. |
| Enzyme Assay |
ATP-Sepharose binding assay [2] ATP-Sepharose binding assay was modified base on previous protocol. Different concentrations of FW-04-806 or 17AAG were added into recombinant NBD Hsp90 protein (10 μg), and then mixtures were incubated with 25 µL preequilibrated γ-phosphate-linked ATP-Sepharose in 200 µL incubation buffer (10 mM Tris–HCl, 50 mM KCl, 5 mM MgCl2, 20 mM Na2MoO4 , 0.01% NP-40, pH 7.5) for 4 h at 4°C. The protein bound to Sepharose beads was separated with 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis and assayed with protein immunoblotting. Colorimetric determination of ATPase activity [2] Malachite green reagent was prepared on the day of use and contained malachite green (0.0812%, w/v), polyvinyl alcohol (2.32%, w/v, dissolves with difficulty and requires heating), ammonium molybdate (5.72%, w/v, in 6 M HCl), and argon water mixed in a ratio of 2:1:1:2 to a golden yellow solution. The assay buffer consisted of 100 mM Tris–HCl, 20 mM KCl, and 6 mM MgCl2, with a pH of 7.4. The experiments were performed in 100 μL of test solution containing 80 μL of malachite green reagent. The test solution contained 0.5 μM Hsp90 protein, 1 mM ATP, and 25, 50, 100, or 200 μM FW-04-806 or vehicle (DMSO). |
| Cell Assay |
Cell Proliferation Assay[2] Cell Types: SKBR3 and MCF-7 cells Tested Concentrations: 6.25, 12.5, 25, 50, 100 μM Incubation Duration: 48 hrs (hours) Experimental Results: Inhibited the proliferation of SKBR3 and MCF-7 cells in a dose-dependent manner. Cell Cycle Analysis[2] Cell Types: SKBR3 and MCF-7 cells Tested Concentrations: 10, 20, 40 μM Incubation Duration: 24 hrs (hours) Experimental Results: Increased the G2/M cell population and diminished the population in the S and G0/G1 phases. Western Blot Analysis[2] Cell Types: SKBR3 and MCF-7 cells Tested Concentrations: 10, 20, 40 μM Incubation Duration: 3, 6, 12, 24 hrs (hours) Experimental Results: diminished the levels of the client proteins HER2, p-HER2, Raf-1, Akt, and p-Akt in a dose and time-dependent manner in SKBR3 cells. decreased the levels of the client proteins Raf-1, Akt, and p-Akt in a dose and time -dependent manner in MCF-7 cells. |
| Animal Protocol |
Animal/Disease Models: BALB/c (nu/nu) athymic mice with SKBR3 and MCF-7 tumor xenograft[2] Doses: 50, 100, 200 mg/kg Route of Administration: po (oral gavage) every 3 days for 24 days Experimental Results: demonstrated inhibition of tumor growth at a rate of 39.1%, 52.7%, and 67.5% in the SKBR3 cell line groups and 27.3%, 39.8%, 54.3% in the MCF-7 cell line groups at the three increasing doses, respectively. Was well tolerated. Animals, tumor xenografts, and test agents for in vivo studies and efficacy [2] BALB/c (nu/nu) athymic mice were used. For SKBR3 and MCF-7 xenografts, 6-mm3 tumor fragments were implanted into the subcutaneous tissue of the axillary region using a trocar needle, and the animals were randomly divided into groups (n = 6) when the bearing tumor reached approximately 20 mm3. FW-04-806 was suspended at the desired concentration for each dose group in an aqueous vehicle containing 10% ethanol, 10% polyethylene glycol 400, and 10% Tween 80. The control group was given 0.4 mL/mouse vehicle solution i.g.; mice in other groups were given 50, 100, or 200 mg/kg of FW-04-806. Doxorubicin hydrochloride was purchased as 10 mg injections and diluted with saline as necessary to achieve the prescribed concentration. |
| References |
[1]. Conglobatin, a novel macrolide dilactone from Streptomyces conglobatus ATCC 31005. J Antibiot (Tokyo). 1979 Sep;32(9):874-7. [2]. FW-04-806 inhibits proliferation and induces apoptosis in human breast cancer cells by binding to N-terminus of Hsp90 and disrupting Hsp90-Cdc37 complex formation. Mol Cancer. 2014 Jun 14;13:150. [3]. Macrolide analog F806 suppresses esophageal squamous cell carcinoma (ESCC) by blocking β1 integrin activation. Oncotarget. 2015 Jun 30;6(18):15940-52. |
| Additional Infomation |
Conglobatin has been reported in Streptomyces conglobatus with data available. Fermentation of deposited cultures of Streptomyces conglobatus, known to produce the polyether antibiotic, ionomycin has resulted in the isolation and characterization of a second metabolite, conglobatin (C28H38N2O6). X-Ray analysis revealed a dimeric macrolide dilactone structure for conglobatin, similar to the structures of the mold metabolites vermiculin and pyrenophorin, from which the absolute configuration of conglobatin has been inferred. The dimer consists of two molecules of 7-hydroxy-8-oxazoyl-2,4,6-trimethyl-2-octenoic acid joined by two ester linkages. [1] Background: Heat shock protein 90 (Hsp90) is a promising therapeutic target and inhibition of Hsp90 will presumably result in suppression of multiple signaling pathways. FW-04-806, a bis-oxazolyl macrolide compound extracted from China-native Streptomyces FIM-04-806, was reported to be identical in structure to the polyketide Conglobatin. Methods: We adopted the methods of chemproteomics, computational docking, immunoprecipitation, siRNA gene knock down, Quantitative Real-time PCR and xenograft models on the research of FW-04-806 antitumor mechanism, through the HER2-overexpressing breast cancer SKBR3 and HER2-underexpressing breast cancer MCF-7 cell line. Results: We have verified the direct binding of FW-04-806 to the N-terminal domain of Hsp90 and found that FW-04-806 inhibits Hsp90/cell division cycle protein 37 (Cdc37) chaperone/co-chaperone interactions, but does not affect ATP-binding capability of Hsp90, thereby leading to the degradation of multiple Hsp90 client proteins via the proteasome pathway. In breast cancer cell lines, FW-04-806 inhibits cell proliferation, caused G2/M cell cycle arrest, induced apoptosis, and downregulated Hsp90 client proteins HER2, Akt, Raf-1 and their phosphorylated forms (p-HER2, p-Akt) in a dose and time-dependent manner. Importantly, FW-04-806 displays a better anti-tumor effect in HER2-overexpressed SKBR3 tumor xenograft model than in HER2-underexpressed MCF-7 model. The result is consistent with cell proliferation assay and in vitro apoptosis assay applied for SKBR-3 and MCF-7. Furthermore, FW-04-806 has a favorable toxicity profile. Conclusions: As a novel Hsp90 inhibitor, FW-04-806 binds to the N-terminal of Hsp90 and inhibits Hsp90/Cdc37 interaction, resulting in the disassociation of Hsp90/Cdc37/client complexes and the degradation of Hsp90 client proteins. FW-04-806 displays promising antitumor activity against breast cancer cells both in vitro and in vivo, especially for HER2-overexpressed breast cancer cells. [2] The paucity of new drugs for the treatment of esophageal squamous cell carcinoma (ESCC) limits the treatment options. This study characterized the therapeutic efficacy and action mechanism of a novel natural macrolide compound F806 in human ESCC xenograft models and cell lines. F806 inhibited growth of ESCC, most importantly, it displayed fewer undesirable side effects on normal tissues in two human ESCC xenograft models. F806 inhibited proliferation of six ESCC cells lines, with the half maximal inhibitory concentration (IC50) ranging from 9.31 to 16.43 μM. Furthermore, F806 induced apoptosis of ESCC cells, contributing to its growth-inhibitory effect. Also, F806 inhibited cell adhesion resulting in anoikis. Mechanistic studies revealed that F806 inhibited the activation of β1 integrin in part by binding to a novel site Arg610 of β1 integrin, suppressed focal adhesion formation, decreased cell adhesion to extracellular matrix and eventually triggered apoptosis. We concluded that F806 would potentially be a well-tolerated anticancer drug by targeting β1 integrin, resulting in anoikis in ESCC cells. [3] |
Solubility Data
| Solubility (In Vitro) | May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples |
| Solubility (In Vivo) |
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples. Injection Formulations (e.g. IP/IV/IM/SC) Injection Formulation 1: DMSO : Tween 80： Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution → 50 μL Tween 80 → 850 μL Saline) *Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution. Injection Formulation 2: DMSO : PEG300 ：Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline) Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO → 900 μL Corn oil) Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals). Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO → 900 μL (20% SBE-β-CD in saline)] *Preparation of 20% SBE-β-CD in Saline (4°C，1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution. Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin → 500 μL Saline) Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO → 100 μLPEG300 → 200 μL castor oil → 650 μL Saline) Injection Formulation 7: Ethanol : Cremophor : Saline = 10： 10 : 80 (i.e. 100 μL Ethanol → 100 μL Cremophor → 800 μL Saline) Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH → 900 μL Corn oil) Injection Formulation 10: EtOH : PEG300：Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline) Oral Formulations Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium) Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals). Oral Formulation 3: Dissolved in PEG400 Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose Oral Formulation 6: Mixing with food powders Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently. (Please use freshly prepared in vivo formulations for optimal results.) |