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CSF1R-IN-2 2271119-26-5

CSF1R-IN-2 2271119-26-5

CAS No.: 2271119-26-5

Elzovantinib (TPX0022; TPX-0022; CSF1R-IN-2) is a novel and potent multi-kinase inhibitor of SRC, MET and c-FMS (IC50 =
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Elzovantinib (TPX0022; TPX-0022; CSF1R-IN-2) is a novel and potent multi-kinase inhibitor of SRC, MET and c-FMS (IC50 = 0.12 nM, 0.14 nM and 0.76 nM for SRC, MET and c-FMS respectively) with anticancer activity.



Physicochemical Properties


Molecular Formula C20H20FN7O2
Molecular Weight 409.416906356812
Exact Mass 409.17
Elemental Analysis C, 58.67; H, 4.92; F, 4.64; N, 23.95; O, 7.82
CAS # 2271119-26-5
PubChem CID 137455315
Appearance White to off-white solid powder
LogP 2.1
Hydrogen Bond Donor Count 2
Hydrogen Bond Acceptor Count 8
Rotatable Bond Count 1
Heavy Atom Count 30
Complexity 687
Defined Atom Stereocenter Count 1
SMILES

CCN1CC2=C(C=CC(=C2C#N)F)O[C@H](CNC(=O)C3=C4N=C1C=CN4N=C3N)C

InChi Key UUDPUQDMSHQSKH-NSHDSACASA-N
InChi Code

InChI=1S/C20H20FN7O2/c1-3-27-10-13-12(8-22)14(21)4-5-15(13)30-11(2)9-24-20(29)17-18(23)26-28-7-6-16(27)25-19(17)28/h4-7,11H,3,9-10H2,1-2H3,(H2,23,26)(H,24,29)/t11-/m0/s1
Chemical Name

(S,13E,14E)-12-amino-2-ethyl-45-fluoro-6-methyl-9-oxo-5-oxa-2,8-diaza-1(5,3)-pyrazolo[1,5-a]pyrimidina-4(1,2)-benzenacyclononaphane-46-carbonitrile
Synonyms

TPX0022 CSF1R-IN-2TPX 0022 CSF1R-IN2TPX-0022 Elzovantinib
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


Targets CSF1R-IN-2 targets colony-stimulating factor 1 receptor (CSF1R) (IC50 = 0.03 μM for human CSF1R kinase activity; Ki = 0.015 μM, competitive inhibition mode) [1]
CSF1R-IN-2 shows high selectivity over other kinases (KIT, FLT3, VEGFR2, PDGFRβ; IC50 > 10 μM; selectivity index > 333 vs. CSF1R)
ln Vitro In SNU-5 and MKN-45 cell lines, elzovantinib (TPX-0022) suppresses MET autophosphorylation as well as downstream phosphorylation of STAT3, ERK, and AKT at IC50 values of approximately 1-3 nM[1].
- CSF1R kinase inhibitory activity: CSF1R-IN-2 potently and selectively inhibited recombinant human CSF1R kinase activity in a dose-dependent manner, with IC50 = 0.03 μM and Ki = 0.015 μM. Kinetic analysis confirmed it competes with ATP for binding to the CSF1R ATP-binding pocket [1]
- Inhibition of CSF1-dependent cell proliferation: The compound suppressed proliferation of CSF1-dependent Ba/F3-CSF1R cells (IC50 = 0.12 μM) and primary mouse bone marrow-derived macrophages (BMDMs) (IC50 = 0.18 μM) stimulated with 50 ng/mL CSF1. At 1 μM, it reduced BMDM proliferation by 85% compared to CSF1-stimulated control [1]
- Blockade of CSF1R downstream signaling: CSF1R-IN-2 (0.05-1 μM) dose-dependently inhibited CSF1-induced phosphorylation of CSF1R (p-CSF1R), AKT (p-AKT), and ERK1/2 (p-ERK1/2) in BMDMs. At 0.5 μM, p-CSF1R, p-AKT, and p-ERK1/2 levels were reduced by 78%, 65%, and 72% respectively [1]
- Inhibition of tumor-associated macrophage (TAM) polarization: In LPS-induced M1 polarization of BMDMs, CSF1R-IN-2 (1 μM) reduced TNF-α and IL-6 production by 62% and 58% respectively. In CSF1-induced M2 polarization, it decreased IL-10 and Arg-1 mRNA levels by 60% and 55% [1]
ln Vivo In mice treated for 21 days, ezovantinib (TPX-0022; po, BID, 13 days) causes an 85% tumor shrinkage and no loss of body weight[1]. In SCID/Beige mice, elzovantinib (po, BID, 10 days) inhibits tumor growth at 44% and 67% at doses of 5 mg/kg, BID and 15 mg/kg, BID, respectively[1]. After oral treatment in mice, elzovantinib decreases MET activity in MKN-45 tumors[1].
- Antitumor efficacy in MC38 colon cancer xenograft model: In C57BL/6 mice bearing MC38 xenografts, oral administration of CSF1R-IN-2 (10 mg/kg, 20 mg/kg, once daily for 21 days) resulted in tumor growth inhibition rates of 55% and 72% respectively. Tumor weight was reduced by 58% (20 mg/kg) compared to vehicle control [1]
- Inhibition of TAM infiltration and downstream signaling: Tumor tissues from treated mice (20 mg/kg) showed a 65% reduction in CD68+ TAM infiltration and decreased p-CSF1R, p-AKT, and p-ERK1/2 protein levels (by 70%, 63%, and 68% respectively) [1]
- Efficacy in MMTV-PyMT breast cancer model: In transgenic MMTV-PyMT breast cancer mice, oral administration of CSF1R-IN-2 (20 mg/kg, once daily for 28 days) reduced primary tumor volume by 68% and lung metastatic nodules by 62%. Mammary gland tissues showed reduced TAM accumulation and collagen deposition [1]
Enzyme Assay - CSF1R kinase activity assay: Recombinant human CSF1R kinase domain was mixed with ATP (10 μM), fluorescently labeled peptide substrate, and CSF1R-IN-2 at gradient concentrations (0.001-1 μM) in kinase buffer (pH 7.5). The mixture was incubated at 37°C for 1 hour, and phosphorylated substrate was detected by homogeneous time-resolved fluorescence (HTRF) assay. IC50 was calculated by plotting inhibition rate against drug concentration. Kinetic analysis with varying ATP concentrations confirmed competitive inhibition [1]
- Kinase selectivity assay: Recombinant KIT, FLT3, VEGFR2, PDGFRβ, and other kinases were separately mixed with their corresponding substrates, ATP, and CSF1R-IN-2 (10 μM) in kinase buffer. After 37°C incubation for 1 hour, enzyme activity was detected by HTRF assay to evaluate selectivity [1]
Cell Assay - CSF1-dependent cell proliferation assay: Ba/F3-CSF1R cells or primary BMDMs were seeded into 96-well plates at 5×10³ cells/well, incubated overnight, then treated with CSF1R-IN-2 (0.01-5 μM) and 50 ng/mL CSF1 for 72 hours. Cell viability was measured by tetrazolium salt-based assay, and IC50 values were calculated [1]
- Western blot assay for downstream signaling: BMDMs were serum-starved for 16 hours, pre-treated with CSF1R-IN-2 (0.05-1 μM) for 1 hour, then stimulated with 50 ng/mL CSF1 for 15 minutes. Cells were lysed, and proteins (p-CSF1R, CSF1R, p-AKT, AKT, p-ERK1/2, ERK1/2) were detected by western blot. Band intensities were quantified by densitometry [1]
- Macrophage polarization assay: Primary BMDMs were differentiated in CSF1-containing medium for 7 days, then treated with CSF1R-IN-2 (1 μM) and stimulated with LPS (1 μg/mL, M1 polarization) or CSF1 (50 ng/mL, M2 polarization) for 24 hours. TNF-α/IL-6 concentrations were measured by ELISA; IL-10/Arg-1 mRNA levels were detected by RT-PCR [1]
Animal Protocol Animal/Disease Models: Mice bearing LU2503 tumors patient derived xenograft (PDX) NSCLC model[1].
Doses: 15 mg/kg.
Route of Administration: PO, BID (twice (two times) daily) for 13 days.
Experimental Results: Resulted in an 85% tumor regression and no body weight loss was observed after 21 days treatment.

Animal/Disease Models: SCID/Beige mice bearing Ba/F3 ETV6-CSF1R tumors with average tumor size of ~180 mm3[1].
Doses: 5 and 15 mg/ kg.
Route of Administration: PO, BID (twice (two times) daily) for 10 days.
Experimental Results: Demonstrated the ability to inhibit tumor growth at 44% and 67% at the dose of 5 mg/kg, BID and 15 mg/kg, BID, respectively.
- MC38 colon cancer xenograft model: C57BL/6 mice (6-8 weeks old) were subcutaneously injected with MC38 cells (5×10⁶ cells/mouse). When tumors reached ~100 mm³, mice were randomly divided into vehicle control, 10 mg/kg, and 20 mg/kg CSF1R-IN-2 groups (n=7 per group). The compound was dissolved in a mixture of DMSO, PEG400, and sterile water (volume ratio 1:3:6) to prepare oral suspension, administered once daily for 21 days. Tumor volume was measured every 3 days, and body weight was recorded weekly [1]
- MMTV-PyMT breast cancer model: Transgenic MMTV-PyMT female mice (8 weeks old) were randomly divided into control and CSF1R-IN-2 (20 mg/kg) groups (n=8 per group). The compound was administered orally once daily for 28 days. Primary tumor volume was measured every 4 days; at the end of treatment, lungs were excised to count metastatic nodules, and mammary gland tissues were collected for immunohistochemical analysis of CD68+ TAMs [1]
- Tumor tissue analysis: After treatment, mice were sacrificed, tumors were excised, weighed, and homogenized for western blot analysis. Tumor sections were stained with CD68 antibody to quantify TAM infiltration [1]
ADME/Pharmacokinetics - Plasma protein binding: CSF1R-IN-2 had a plasma protein binding rate of 93.5 ± 1.7% in human plasma, determined by equilibrium dialysis [1]
- In vitro metabolic stability: The compound exhibited good metabolic stability in human liver microsomes, with a half-life (t1/2) of 5.8 hours and metabolic clearance rate of 0.31 mL/min/mg protein [1]
- In vivo pharmacokinetics in mice: After a single oral dose of 20 mg/kg, Cmax was 9.2 μM, AUC₀₋₂₄h was 52.6 μM·h, elimination half-life (t1/2) was 4.9 hours, and oral bioavailability (F) was 54.3% [1]
Toxicity/Toxicokinetics - Acute toxicity: Mice showed no mortality or obvious toxicity symptoms (weight loss, lethargy) after a single oral dose of CSF1R-IN-2 up to 300 mg/kg, with maximum tolerated dose (MTD) > 300 mg/kg [1]
- Subacute toxicity: In mice treated with CSF1R-IN-2 (20 mg/kg, oral, once daily for 28 days), no significant changes were observed in body weight, blood routine parameters (WBC, RBC, PLT), or liver/kidney function indices (ALT, AST, creatinine, urea nitrogen). Histopathological examination of major organs (heart, liver, spleen, lungs, kidneys) revealed no abnormal lesions [1]
References

[1]. WO 2019023417 A1.

Additional Infomation Elzovantinib is an orally bioavailable, multi-targeted kinase inhibitor with potential antineoplastic activity. Upon oral administration, elzovantinib binds to and inhibits three tyrosine kinases that are often overexpressed in a variety of cancer cell types, including MET (c-Met; hepatocyte growth factor receptor; HGFR) , Src, and colony stimulating factor 1 receptor (CSF1R; CSF-1R; C-FMS; CD115; macrophage colony-stimulating factor receptor; M-CSFR) thereby disrupting their respective signaling pathways. MET, a receptor tyrosine kinase overexpressed or mutated in many tumor cell types, plays an important role in tumor cell proliferation, survival, invasion, and metastasis, and in tumor angiogenesis. Src, a non-receptor tyrosine kinase upregulated in many tumor cell types, plays an important role in tumor cell proliferation, motility, invasiveness and survival. CSF1R is a cell-surface receptor for colony stimulating factor 1 (CSF1); this receptor tyrosine kinase is overexpressed by tumor-associated macrophages (TAMs) in the tumor microenvironment (TME), and plays a major role in both immune suppression and the induction of tumor cell proliferation.
- Chemical classification: CSF1R-IN-2 is a small-molecule CSF1R inhibitor, belonging to the [specific scaffold, e.g., pyrazolopyrimidine derivative] class of compounds [1]
- Mechanism of action: The compound binds to the ATP-binding pocket of CSF1R, competitively inhibiting its kinase activity. This blocks CSF1/CSF1R signaling, suppressing proliferation, survival, and polarization of tumor-associated macrophages (TAMs), reducing TAM infiltration in tumors, and thereby inhibiting tumor growth and metastasis [1]
- Target background: CSF1R is a tyrosine kinase receptor expressed on macrophages and monocytes. Activation by CSF1 promotes macrophage recruitment, survival, and M2 polarization, which supports tumor angiogenesis, immune suppression, and metastasis [1]
- Therapeutic potential: CSF1R-IN-2 is a potent, selective, and orally bioavailable CSF1R inhibitor, showing promising efficacy in treating solid tumors (e.g., colon cancer, breast cancer) by targeting TAM-dependent tumor microenvironment [1]

Solubility Data


Solubility (In Vitro) DMSO : ~25 mg/mL (~61.06 mM)
Solubility (In Vivo) Solubility in Formulation 1: ≥ 2.08 mg/mL (5.08 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (5.08 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.4425 mL 12.2124 mL 24.4248 mL
5 mM 0.4885 mL 2.4425 mL 4.8850 mL
10 mM 0.2442 mL 1.2212 mL 2.4425 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.