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ARN-21934 2230854-93-8

ARN-21934 2230854-93-8

CAS No.: 2230854-93-8

ARN-21934 is a specific, BBB (blood-brain barrier) permeable (penetrable) inhibitor of human topoisomerase II α. Compar
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ARN-21934 is a specific, BBB (blood-brain barrier) permeable (penetrable) inhibitor of human topoisomerase II α. Compared with the anticancer agent Etoposide (IC50=120 μM), ARN-21934 inhibits DNA relaxation with IC50 of 2 μM. ARN-21934 has good in vivo pharmacokinetic properties and is a promising anticancer lead compound.

Physicochemical Properties


Molecular Formula C21H24N6
Molecular Weight 360.4555
Exact Mass 360.206
CAS # 2230854-93-8
PubChem CID 135150944
Appearance Light yellow to green yellow solid powder
LogP 2.6
Hydrogen Bond Donor Count 2
Hydrogen Bond Acceptor Count 6
Rotatable Bond Count 4
Heavy Atom Count 27
Complexity 458
Defined Atom Stereocenter Count 0
SMILES

N([H])([H])C1([H])C([H])([H])C2C(=NC(C3C([H])=C([H])N=C([H])C=3[H])=NC=2C([H])([H])C1([H])[H])N([H])C1C([H])=C([H])C(=C([H])C=1[H])N(C([H])([H])[H])C([H])([H])[H]

InChi Key CKXSRLUXTFDZCF-UHFFFAOYSA-N
InChi Code

InChI=1S/C21H24N6/c1-27(2)17-6-4-16(5-7-17)24-21-18-13-15(22)3-8-19(18)25-20(26-21)14-9-11-23-12-10-14/h4-7,9-12,15H,3,8,13,22H2,1-2H3,(H,24,25,26)
Chemical Name

4-N-[4-(dimethylamino)phenyl]-2-pyridin-4-yl-5,6,7,8-tetrahydroquinazoline-4,6-diamine
HS Tariff Code 2934.99.9001
Storage

Powder-20°C 3 years

4°C 2 years

In solvent -80°C 6 months

-20°C 1 month

Shipping Condition Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)

Biological Activity


Targets topoisomerase II alpha topoisomerase II beta
ln Vitro For topoIIα and topoIIβ, ARN-21934 exhibits a distinct penchant. With an IC50 value of 2 μM for topoIIα-inhibited DNA relaxation and 120 μM for topoIIβ-inhibited DNA relaxation, ARN-21934 is more effective against the α isoform [1]. Human cancer cell lines are displayed in a small panel on ARN-21934. Its IC50 values against melanoma (A375 and G-361), breast (MCF7), endometrial (HeLa), lung (A549), androgen-independent prostate (DU145) cancer cells are 12.6 μM, 8.1 μM, 15.8 μM, 38.2 μM, 17.1 μM, and 11.5 μM, respectively[1].
ln Vivo After fifteen minutes, the intraperitoneal injection of ARN-21934 (10 mg/kg; single dosage) reaches a maximum plasma concentration of 0.68 μg/mL. The half-life in circulation is 149 minutes, and 360 minutes after injection, it is still present in plasma. Additionally, the molecule shows excellent clearance values (0.116 L/(min kg)). Furthermore, ARN-21934 can enter the brain and remains there 360 minutes after injection, reaching its maximal compound concentration in 60 minutes.[1]
References

[1]. Novel, Potent, and Druglike Tetrahydroquinazoline Inhibitor That Is Highly Selective for Human Topoisomerase II α over β. J Med Chem. 2020 Nov 12;63(21):12873-12886.


Solubility Data


Solubility (In Vitro) DMSO : 8.33 mg/mL (23.11 mM)
Solubility (In Vivo) Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300:Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)

Oral Formulations Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders

Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7742 mL 13.8712 mL 27.7423 mL
5 mM 0.5548 mL 2.7742 mL 5.5485 mL
10 mM 0.2774 mL 1.3871 mL 2.7742 mL
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.